PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4BS_ED206A2BB.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 166aa    MW: 18891.1 Da    PI: 10.29
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4BS_ED206A2BB.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.7e-11563563
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                           kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l+   + l+ e+
  Traes_4BS_ED206A2BB.1  5 KRAKRILANRQSAARSKERKIKYTGELERKVQTLQTEATTLSAQLTLLQRDTSGLTVEN 63
                           9**********************************************999888887776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-15165IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.703366IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-11559No hitNo description
SuperFamilySSF579593.09E-11556No hitNo description
PfamPF001701.5E-9559IPR004827Basic-leucine zipper domain
CDDcd147031.42E-20655No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
LLDPKRAKRI LANRQSAARS KERKIKYTGE LERKVQTLQT EATTLSAQLT LLQRDTSGLT  60
VENRELKLRL QSMEEQAKLR DALNDALREE VQRLKIAAGQ VPNMNGNPFG GGLHQHQQQQ  120
QQIPNYFSQQ QMHYQGHQHH HPQNHSQNSS NGGQSLSGQS DSMDFM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF7524310.0KF752431.1 Triticum aestivum cultivar CB037 VIP1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001141497.13e-88putative bZIP transcription factor superfamily protein
RefseqXP_002449035.14e-88hypothetical protein SORBIDRAFT_05g003810
SwissprotQ9MA752e-52VIP1_ARATH; Transcription factor VIP1
TrEMBLA0A0A7C1B81e-117A0A0A7C1B8_WHEAT; VIP1
TrEMBLW5EE951e-119W5EE95_WHEAT; Uncharacterized protein
STRINGSb05g003810.11e-87(Sorghum bicolor)
STRINGGRMZM2G079365_P011e-87(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.12e-39VIRE2-interacting protein 1